CSHL GENOME INFORMATICS 2011 day2

Meeting page is; http://meetings.cshl.edu/meetings/info11.shtml . Tweets are collected around 2011-11-04T11:20+9:00 with hashtag gi2011, then removed RT/duplication. remained free to edit so please append posts or tag. day1 posts aggrigation is http://togetter.com/li/209522 .
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Daniel Standage @byuhobbes

This morning's session on population and personal genomics. I'll be a microphone carrier, so hope I can keep up the tweets #gi2011

2011-11-04 21:51:33
Stephen Turner @strnr

The population and personal #genomics section is about to start at day 3 of #gi2011

2011-11-04 21:59:33
Deanna Church (she/her) @deannachurch

Thanks for all of the #gi2011 tweets- hope the bandwidth in Grace holds up!

2011-11-04 22:03:22
Stephen Turner @strnr

First up in the personal genomics section of #gi2011 - Li Ding on genomic landscape of AML

2011-11-04 22:03:30
Stephen Turner @strnr

LD performing analysis to ID mutation clusters in tumor based on variant allele frequency #gi2011

2011-11-04 22:05:50
Stephen Turner @strnr

Now speaking at #gi2011: Mark Gerstein on genomic variation in ENCODE TFBSs and transcribed RNAs. Slides here: http://t.co/RkxNNPa0

2011-11-04 22:44:44
Daniel Standage @byuhobbes

No indication of tweetability/disclosure for the remaining talks for this session #gi2011

2011-11-04 22:46:32
Stephen Turner @strnr

Gerstein: ncVAR for analyzing genomic variation from non-coding elements http://t.co/Phg4p0wG #gi2011 #bioinformatics

2011-11-04 22:50:29
Stephen Turner @strnr

even w/o notification of tweetability, i'm assuming if i can find your slides via google, you don't mind me tweeting #gi2011 cc @byuhobbes

2011-11-04 22:54:44
Stephen Turner @strnr

Gerstein - allele specific binding and expression using AlleleSeq http://t.co/v7OXSEVr #gi2011 #bioinformatics

2011-11-04 22:59:43
Stephen Turner @strnr

The personal genomics session at #gi2011 should really be called "structural variation discovery and variant annotation"

2011-11-04 23:11:15
James Taylor @jxtx

#gi2011 Hard to get speakers to mark tweatability without being disruptive. Can we just agree to *require* a license statement on slide one?

2011-11-04 23:16:32
Stephen Turner @strnr

+1 RT @jxtx: #gi2011 Hard to get speakers to mark tweatability w/o disruption. Can we agree to *require* a license statement on slide one?

2011-11-04 23:20:37
Stephen Turner @strnr

@jxtx @GreeneScientist or a more liberal approach - perhaps require a * to opt-out of tweetability instead of opting-in #gi2011

2011-11-04 23:29:53
Stephen Turner @strnr

Many of this morning's speakers referencing this NRG review on structural variation discovery http://t.co/aJQK2Ni0 #gi2011

2011-11-04 23:56:05
Stephen Turner @strnr

S. Sahinalp - VariationHunter: Maximum Parsimony based Structural variation http://t.co/dt11ZmKy #gi2011

2011-11-04 23:57:13
Genome Research @genomeresearch

#gi2011 C Sahinalp Simultaneous structural variation discovery among multiple genomes http://t.co/7MfLIMYl

2011-11-05 00:03:45
Daniel Standage @byuhobbes

Ghosh: rare alleles or reference errors? #gi2011

2011-11-05 00:17:16
Daniel Standage @byuhobbes

Blankenberg discusses reproducibility and best practices in bioinformatics literature; everyone should listen! #gi2011

2011-11-05 00:47:03
Stephen Turner @strnr

Some good talks from @CompleteGenomic and the #usegalaxy folks this morning, but #gi2011 bandwidth too bad to say more.

2011-11-05 00:47:45
Daniel Standage @byuhobbes

People love implementing genome browsers #gi2011

2011-11-05 00:59:14