riken single cell symposium

ハッシュタグ rikenscsで集めただけです。シンポジウムのページはhttp://singlecell.riken.jp/en/report/post679
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Piero Carninci @carninci

let's use #RIKENSCS for the RIKEN Single Cell Symposium starting now. Please specify at the beginning of the talk if this is not twittable

2017-07-06 09:26:52
Takeya Kasukawa @kasukawa

今日と明日のシンポジウムのハッシュタグは #RIKENSCS

2017-07-06 09:39:10
JayShin @JayShin

RIKEN Single Cell Symposium starting now #RIKENSCS

2017-07-06 09:41:20
Marina Lizio @MariChan9

A promising SC transcriptome profiling technique in cancer tissue presented, performing > Drop-seq>10X #RIKENSCS

2017-07-06 10:17:11
JayShin @JayShin

Immune diversity predicts malignancy of cancer defined by single cell RNA profiling #RIKENSCS

2017-07-06 10:32:37
Piero Carninci @carninci

Shin-Ichi Hashimoto among other interesting topics talked about mRNA transfer cell to cell by exosomes #RIKENSCS

2017-07-06 10:35:39
Takeya Kasukawa @kasukawa

Although only Japanese reports can be found, this talk mayve based on: kaken.nii.ac.jp/ja/grant/KAKEN… #RIKENSCS

2017-07-06 10:39:49
Marina Lizio @MariChan9

VFAC, a vertical chamber chip for capturing mRNAs...but 34 chips for ~500 cells...scalable? cost-effective? #rikenscs

2017-07-06 10:51:09
Marina Lizio @MariChan9

S. Poulain explains RIKEN's nanoCAGE protocol (10.1101/pdb.prot5559) and its adaptation to SC #RIKENSCS #SingleCellCAGEftw

2017-07-06 11:03:19
Marina Lizio @MariChan9

Tackling aging; mice several age stages, several organs, 10X Genomics single cell RNA-seq, ATAC-seq, methilome microbiome etc #RIKENSCS

2017-07-06 11:19:01
Piero Carninci @carninci

Afternoon session start with Amos Tanay using single cell approaches to characterize epigenome memory #RIKENSCS

2017-07-06 12:47:51
Piero Carninci @carninci

Tanay: Although RNAseq is very powerful still does not tell what the cells is going to do (epigenome machinery etc is also needed) #RIKENSCS

2017-07-06 12:50:04
Marina Lizio @MariChan9

FACS+MARS-seq could help find SC subpopulations #RIKENSCS

2017-07-06 12:53:47
Piero Carninci @carninci

Losing stemness in the erythro differentiation associated with increased proliferation, as determined by single cell analysis #RIKENSCS

2017-07-06 12:55:35
Takeya Kasukawa @kasukawa

Massively Parallel Single-Cell RNA-Seq for Marker-Free Decomposition of Tissues into Cell Types science.sciencemag.org/content/343/61… #RIKENSCS

2017-07-06 12:56:33
Marina Lizio @MariChan9

Times for single cell Bisulfite seq have come! #RIKENSCS

2017-07-06 13:00:28
Piero Carninci @carninci

DNA methylation has been too expensive. Targeted bisulfite sequencing to cut down costs, using 100-300K reads/cell ($ feasible) #RIKENSCS

2017-07-06 13:00:43
Piero Carninci @carninci

DNA methylation is a clonally transmittable mark. There are some escapers, that gain the expression of specific genes. #RIKENSCS

2017-07-06 13:06:10
Piero Carninci @carninci

Tanay: DNA methylation has a functional role to repress genes, as verified by inhibiting methylation machinery. #RIKENSCS

2017-07-06 13:07:41
Marina Lizio @MariChan9

Times for single cell Hi-C have also come!!! #RIKENSCS

2017-07-06 13:10:30
Piero Carninci @carninci

hiC on single cell allows to follow dymanic of chromosome changes in cell cycle #RIKENSCS

2017-07-06 13:12:34
Piero Carninci @carninci

Mike Stubbington on the human cell atlas outlining the main missions of the project at the meeting @riken_yokohama @intlcellatlas #RIKENSCS

2017-07-06 13:19:39
Piero Carninci @carninci

Single cell RNA sequencing is on the the main technologies of @humancellatlas to understand many facets of cell types and states #RIKENSCS

2017-07-06 13:21:44
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