AGBT tweets 2012 (2)
Myers: DNA methylation, whole genome bisulfite expensive. Compromise = RRBS, w/ Illumina 450k array. Very sensitive, quantitative #AGBT
2012-02-17 23:23:12Myers: analysis of DNA methylation in family shows genetics have strong effect, http://t.co/TxLlZIle #AGBT
2012-02-17 23:23:26This afternoon at Poster 59, @deannachurch will discuss the impact of structural variation on genome assembly. #AGBT http://t.co/1Kj0Xmpy
2012-02-17 23:23:59RM: genetics has a strong affect on methylation patterns. #AGBT
2012-02-17 23:24:11#AGBT Rick Myers: 92% allele specific methylation is genetic, 8% is imprinting
2012-02-17 23:24:19Myers: Genetics has a strong effect on methylation patterns, 8% allele-specific imprinting, 92% was genetic #AGBT
2012-02-17 23:26:00#AGBT Rick Myers: in clinical trial of anti-DR5 antibody in breast cancer, methylation at 114 CpGs is associated w response to therapy
2012-02-17 23:26:04Good lineup at #AGBT this morning: Rick Myers (HudsonAlpha), Tom Gingeras (CSHL), Geoffrey Smith (Illumina), then much-needed coffee.
2012-02-17 23:27:11Com to poster 59 this afternoon at #AGBT to see what we are up to with the reference assembly. #AGBT
2012-02-17 23:27:18"correlation between methylation and gene expression depends on location of CpG" Rick Myers #AGBT
2012-02-17 23:27:18Rick Myers, Hudson Alpha, shows 114 CpGs associated with response to antibody therapy. #AGBT
2012-02-17 23:27:42Myers: Correlation of methylation and gene expression depends on location of CpG #AGBT
2012-02-17 23:27:47+1 RT @girlscientist: Myers: analysis of DNA methylation in family shows genetics have strong effect, http://t.co/hgCK8IX7 #AGBT #pm101
2012-02-17 23:28:21#AGBT Rick Myers: methylation near TSSs negatively correlates w gene expression
2012-02-17 23:28:55#AGBT Rick Myers: gene body methylation positively correlates w gene expression EXCEPT when CpG islands in gene bodies are methylated
2012-02-17 23:29:49#AGBT Rick Myers: these gene body CGI are typically enhancers, and need to be unmethylated for gene to be transcribed
2012-02-17 23:30:25Tonight at 9:30 in Salon G, NCBI's Eugene Yaschenko will talk about new NGS data compression strategies. #AGBT http://t.co/1Kj0Xmpy
2012-02-17 23:31:20Genetics meets genomics when variants correlate with phenotype RM #agbt
2012-02-17 23:32:14Great roundtable discussion this morning with Carlos Bustamante of Stanford U at #AGBT http://t.co/7fcXmUAy
2012-02-17 23:32:36Good morning @Personal_RX_WI friends at #agbt. What's on the agenda for today?
2012-02-17 23:33:59Now up Tom Ginger as on important lessons from complex genomes. #AGBT
2012-02-17 23:36:22#ONT are talkng today at #AGBT, anyone want to place a bet on the type and number of genomes they have sequenced?
2012-02-17 23:36:36a real fun video (not sure of the facts yet) from #ionTorrent on homopolymer comparisons with #illumina = http://t.co/TcAfFaYQ #agbt #ngs
2012-02-17 23:36:46#AGBT Tom Gingeras: lessons learned from complex genomes
2012-02-17 23:36:56Day 3 #AGBT Genomic Studies and New Tech. Looking forward to Oxford Nanopore single molecule seq talk late morning. Stay tuned. . .
2012-02-17 23:38:08