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Marc RobinsonRechavi @marcrr@ecoevo.social
@marc_rr
Collaborative work #biocuration2019 @rhea_db pic.twitter.com/MsgMvNOiv9
2019-04-10 18:20:00
拡大
Small Cat
@SMaLLCaT4Sci
It's not that the biological question is so difficult, it's really connecting all these database in the right way #biocuration2019 . Learning SPARQL can give you the answers you need pic.twitter.com/qHlmvItzgl
2019-04-10 18:21:09
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Marc RobinsonRechavi @marcrr@ecoevo.social
@marc_rr
Anne Morgat is now “a SPARQL addict” #biocuration2019
2019-04-10 18:21:16
Chris Mungall
@chrismungall
#biocuration2019 AM: using linked data and SPARQL to answer complex queries connecting multiple databases, e.g drugs with assay targeting sphingolipids. AM "I am now a SPARQL addict"
2019-04-10 18:22:01
Small Cat
@SMaLLCaT4Sci
And here is the answer: use federated queries! #biocuration2019 pic.twitter.com/ukLt2N6nXK
2019-04-10 18:22:25
拡大
Marc RobinsonRechavi @marcrr@ecoevo.social
@marc_rr
One take home of Anne’s talk: Biology, Chemistry and Computer sciences: no hard borders #biocuration2019 #interdisciplinarity
2019-04-10 18:23:49
Jerven Bolleman
@jervenbolleman
Federated #sparql queries mentioned by #sparql addict our @rhea_db and @uniprot biicurator Anne #biocuration2019 pic.twitter.com/4JUFKophsM
2019-04-10 18:23:56
拡大
Small Cat
@SMaLLCaT4Sci
And the next step: make a jupyter notebook for your queries, for repeatability and reproducibility #biocuration2019 pic.twitter.com/xIAuVb2R2l
2019-04-10 18:24:28
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Chris Mungall
@chrismungall
#biocuration2019 AM: presenting @jervenbolleman's work translating HAMAP rules to SPARQL
2019-04-10 18:24:33
Jerven Bolleman
@jervenbolleman
I get a very nice compliment at #biocuration2019 pic.twitter.com/AHp36nOUvs
2019-04-10 18:24:44
拡大
Small Cat
@SMaLLCaT4Sci
More chemistry is needed in biology; I couldn't agree more! #biocuration2019 #cheminformatics pic.twitter.com/faKBMEIFDd
2019-04-10 18:26:07
拡大
Marc RobinsonRechavi @marcrr@ecoevo.social
@marc_rr
Future of @rhea_db: integration into @reactome and @news4go, and more chemoinformatics! #biocuration2019
2019-04-10 18:26:27
David Armstrong
@DaveASci
'No hard borders between Biology and Chemistry' says Anne Morgat, winner of the #biocuration2019 career award. I guess in this analogy, the PDB is the Schengen area? pic.twitter.com/wi6iNAtaXG
2019-04-10 18:27:47
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FAIRlady
@SusannaASansone
Thank you @biocurator for the invite and the book! More discussion at break (incl packing tips, strictly hand luggage!). Celebrating all things biocuration, our funders, collaborators, my group & exp @Drosophilic & @Phil_at_OeRC #biocuration2019 Slides at slideshare.net/SusannaSansone… pic.twitter.com/tHUsOWjMi3
2019-04-10 18:28:02
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Small Cat
@SMaLLCaT4Sci
3rd prize for poster: @wormbase team #biocuration2019 pic.twitter.com/q4FkERF6S6
2019-04-10 18:31:06
拡大
Marc RobinsonRechavi @marcrr@ecoevo.social
@marc_rr
Poster prizes #biocuration2019 3rd place Kimberley Van Auken @wormbase 👍 2nd place Lorna Richardson @emblebi 😀 1st place Suvarna Nadendla @ecoontology 👏 Great choices!
2019-04-10 18:32:02
Int Soc Biocuration
@biocurator
Look out for the photo montage shots in between the talks at #biocuration2019 pic.twitter.com/4R313L5mFB
2019-04-10 18:32:29
拡大
Small Cat
@SMaLLCaT4Sci
2nd poster prize Lorna Richardson #biocuration2019 pic.twitter.com/2lfYRRq9ab
2019-04-10 18:32:39
拡大
Small Cat
@SMaLLCaT4Sci
1st poster prize: Suvarna Nadendla #biocuration2019 pic.twitter.com/s6wh6TtdZN
2019-04-10 18:33:22
拡大
Int Soc Biocuration
@biocurator
Congratulations to the #biocuration2019 poster prize winners: Suvarna Nadendla, @UMmedschool, Lorna Richardson @emblebi, and Kimberley Van Auken @wormbase. There's just still time to check out their posters if you haven't yet seen them! @emagein_that @ecoontology
2019-04-10 18:37:36
Small Cat
@SMaLLCaT4Sci
Metadata talk: the info someone needs to reuse your data #biocuration2019 pic.twitter.com/TY1AbVjP7y
2019-04-10 19:25:42
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Dr. Sue Bello
@drsbello
Kicking off the standards and ontologies section with Jiawei Cui: metadata standards for biomedical data #biocuration2019
2019-04-10 19:26:00
Dr. Sue Bello
@drsbello
JC: Current standards are scattered in isolated islands, need to build bridges to connect these #biocuration2019
2019-04-10 19:28:11
Egon Willighⓐgen
@egonwillighagen
@rhea_db @chrismungall @news4go @chebit @uniprot of course, if EC is a core resource, it's not just "use" that matters, but actually continued maintenance and development. #biocuration2019
2019-04-10 19:28:37
Small Cat
@SMaLLCaT4Sci
@AtlasEwas Okay really cool! I'm asking all these questions because we are using graphs and network analysis in our group as well @bigcat_UM . We're now using @neo4j , what about you @AtlasEwas? Thank you for getting back to me, acoustics are really bad at #biocuration2019 unfortunately :(
2019-04-10 19:30:06